Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTCAO00442 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.02■■□□□ 1.44
RTCAO00442 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.02■■□□□ 1.44
RTCAO00442 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.02■■□□□ 1.44
RTCAO00442 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTCAO00442 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTCAO00442 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RTCAO00442 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.01■■□□□ 1.43
RTCAO00442 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.01■■□□□ 1.43
RTCAO00442 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RTCAO00442 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTCAO00442 AC018358.1-201ENST00000631079 1402 ntBASIC24.01■■□□□ 1.43
RTCAO00442 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24■■□□□ 1.43
RTCAO00442 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
RTCAO00442 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24■■□□□ 1.43
RTCAO00442 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
RTCAO00442 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24■■□□□ 1.43
RTCAO00442 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RTCAO00442 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTCAO00442 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTCAO00442 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTCAO00442 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RTCAO00442 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.98■■□□□ 1.43
RTCAO00442 MIR7108-201ENST00000614319 87 ntBASIC23.97■■□□□ 1.43
RTCAO00442 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTCAO00442 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RTCAO00442 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTCAO00442 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.96■■□□□ 1.43
RTCAO00442 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
RTCAO00442 CR559946.2-201ENST00000623684 991 ntBASIC23.95■■□□□ 1.42
RTCAO00442 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
RTCAO00442 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
RTCAO00442 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTCAO00442 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.94■■□□□ 1.42
RTCAO00442 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTCAO00442 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTCAO00442 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
RTCAO00442 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTCAO00442 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTCAO00442 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTCAO00442 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RTCAO00442 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTCAO00442 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RTCAO00442 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RTCAO00442 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
RTCAO00442 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.92■■□□□ 1.42
RTCAO00442 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.91■■□□□ 1.42
RTCAO00442 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTCAO00442 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTCAO00442 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTCAO00442 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTCAO00442 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.91■■□□□ 1.42
RTCAO00442 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.91■■□□□ 1.42
RTCAO00442 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTCAO00442 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTCAO00442 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTCAO00442 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTCAO00442 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
RTCAO00442 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
RTCAO00442 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.9■■□□□ 1.42
RTCAO00442 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.9■■□□□ 1.42
RTCAO00442 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.9■■□□□ 1.42
RTCAO00442 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTCAO00442 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTCAO00442 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTCAO00442 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RTCAO00442 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RTCAO00442 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
RTCAO00442 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RTCAO00442 MIR3648-2-201ENST00000581792 180 ntBASIC23.89■■□□□ 1.41
RTCAO00442 MIR3648-1-201ENST00000615959 180 ntBASIC23.89■■□□□ 1.41
RTCAO00442 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.89■■□□□ 1.41
RTCAO00442 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.88■■□□□ 1.41
RTCAO00442 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
RTCAO00442 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RTCAO00442 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTCAO00442 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RTCAO00442 AL121749.1-202ENST00000609313 2153 ntBASIC23.86■■□□□ 1.41
RTCAO00442 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTCAO00442 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTCAO00442 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.86■■□□□ 1.41
RTCAO00442 AC016575.1-201ENST00000607026 382 ntBASIC23.86■■□□□ 1.41
RTCAO00442 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
RTCAO00442 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.86■■□□□ 1.41
RTCAO00442 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTCAO00442 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RTCAO00442 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
RTCAO00442 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTCAO00442 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
RTCAO00442 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
RTCAO00442 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
RTCAO00442 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTCAO00442 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTCAO00442 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTCAO00442 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
RTCAO00442 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.83■■□□□ 1.41
RTCAO00442 HLA-V-202ENST00000446817 847 ntBASIC23.83■■□□□ 1.41
RTCAO00442 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTCAO00442 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
RTCAO00442 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms