Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Pcdh1F7BJK1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pcdh1F7BJK1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh1F7BJK1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh1F7BJK1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh1F7BJK1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Pcdh1F7BJK1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh1F7BJK1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Pcdh1F7BJK1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh1F7BJK1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdh1F7BJK1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pcdh1F7BJK1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pcdh1F7BJK1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdh1F7BJK1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh1F7BJK1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh1F7BJK1 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.63■□□□□ 0.89
Pcdh1F7BJK1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh1F7BJK1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh1F7BJK1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.62■□□□□ 0.89
Pcdh1F7BJK1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.62■□□□□ 0.89
Pcdh1F7BJK1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdh1F7BJK1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh1F7BJK1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh1F7BJK1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh1F7BJK1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh1F7BJK1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdh1F7BJK1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdh1F7BJK1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh1F7BJK1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh1F7BJK1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdh1F7BJK1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdh1F7BJK1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh1F7BJK1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh1F7BJK1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh1F7BJK1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pcdh1F7BJK1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh1F7BJK1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh1F7BJK1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Pcdh1F7BJK1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcdh1F7BJK1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh1F7BJK1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh1F7BJK1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh1F7BJK1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.57■□□□□ 0.88
Pcdh1F7BJK1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh1F7BJK1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh1F7BJK1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh1F7BJK1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh1F7BJK1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh1F7BJK1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh1F7BJK1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh1F7BJK1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh1F7BJK1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh1F7BJK1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh1F7BJK1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh1F7BJK1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Pcdh1F7BJK1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh1F7BJK1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh1F7BJK1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh1F7BJK1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh1F7BJK1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh1F7BJK1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh1F7BJK1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh1F7BJK1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh1F7BJK1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh1F7BJK1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh1F7BJK1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
Pcdh1F7BJK1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh1F7BJK1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh1F7BJK1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Pcdh1F7BJK1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh1F7BJK1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh1F7BJK1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh1F7BJK1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh1F7BJK1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh1F7BJK1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Pcdh1F7BJK1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdh1F7BJK1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Pcdh1F7BJK1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdh1F7BJK1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh1F7BJK1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh1F7BJK1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh1F7BJK1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh1F7BJK1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh1F7BJK1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh1F7BJK1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh1F7BJK1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh1F7BJK1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh1F7BJK1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh1F7BJK1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh1F7BJK1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh1F7BJK1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh1F7BJK1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Pcdh1F7BJK1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdh1F7BJK1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh1F7BJK1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh1F7BJK1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh1F7BJK1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pcdh1F7BJK1 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.46■□□□□ 0.87
Pcdh1F7BJK1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh1F7BJK1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 122.7 ms