Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf4lE9Q2N0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpsf4lE9Q2N0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.52■□□□□ 0.72
Cpsf4lE9Q2N0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.52■□□□□ 0.72
Cpsf4lE9Q2N0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf4lE9Q2N0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cpsf4lE9Q2N0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Cpsf4lE9Q2N0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf4lE9Q2N0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf4lE9Q2N0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cpsf4lE9Q2N0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cpsf4lE9Q2N0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf4lE9Q2N0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf4lE9Q2N0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Cpsf4lE9Q2N0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cpsf4lE9Q2N0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf4lE9Q2N0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cpsf4lE9Q2N0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.49■□□□□ 0.71
Cpsf4lE9Q2N0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.49■□□□□ 0.71
Cpsf4lE9Q2N0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf4lE9Q2N0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf4lE9Q2N0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf4lE9Q2N0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf4lE9Q2N0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf4lE9Q2N0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.48■□□□□ 0.71
Cpsf4lE9Q2N0 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.48■□□□□ 0.71
Cpsf4lE9Q2N0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf4lE9Q2N0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Cpsf4lE9Q2N0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4lE9Q2N0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4lE9Q2N0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4lE9Q2N0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4lE9Q2N0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4lE9Q2N0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4lE9Q2N0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4lE9Q2N0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf4lE9Q2N0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf4lE9Q2N0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.46■□□□□ 0.71
Cpsf4lE9Q2N0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.46■□□□□ 0.71
Cpsf4lE9Q2N0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf4lE9Q2N0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf4lE9Q2N0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf4lE9Q2N0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf4lE9Q2N0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf4lE9Q2N0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf4lE9Q2N0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf4lE9Q2N0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf4lE9Q2N0 Mir3960-201ENSMUST00000198213 73 ntBASIC19.44■□□□□ 0.7
Cpsf4lE9Q2N0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf4lE9Q2N0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cpsf4lE9Q2N0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf4lE9Q2N0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf4lE9Q2N0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf4lE9Q2N0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf4lE9Q2N0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.42■□□□□ 0.7
Cpsf4lE9Q2N0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf4lE9Q2N0 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.42■□□□□ 0.7
Cpsf4lE9Q2N0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.42■□□□□ 0.7
Cpsf4lE9Q2N0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.42■□□□□ 0.7
Cpsf4lE9Q2N0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Cpsf4lE9Q2N0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf4lE9Q2N0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.41■□□□□ 0.7
Cpsf4lE9Q2N0 Gm45364-201ENSMUST00000210883 159 ntBASIC19.41■□□□□ 0.7
Cpsf4lE9Q2N0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf4lE9Q2N0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf4lE9Q2N0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf4lE9Q2N0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cpsf4lE9Q2N0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf4lE9Q2N0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf4lE9Q2N0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cpsf4lE9Q2N0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.39■□□□□ 0.69
Cpsf4lE9Q2N0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.39■□□□□ 0.69
Cpsf4lE9Q2N0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.38■□□□□ 0.69
Cpsf4lE9Q2N0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf4lE9Q2N0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf4lE9Q2N0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf4lE9Q2N0 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.37■□□□□ 0.69
Cpsf4lE9Q2N0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf4lE9Q2N0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.36■□□□□ 0.69
Cpsf4lE9Q2N0 Gm9812-201ENSMUST00000061934 968 ntBASIC19.36■□□□□ 0.69
Cpsf4lE9Q2N0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf4lE9Q2N0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf4lE9Q2N0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cpsf4lE9Q2N0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.34■□□□□ 0.69
Cpsf4lE9Q2N0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cpsf4lE9Q2N0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf4lE9Q2N0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.34■□□□□ 0.69
Cpsf4lE9Q2N0 Gm6311-201ENSMUST00000073790 878 ntBASIC19.34■□□□□ 0.69
Cpsf4lE9Q2N0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf4lE9Q2N0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf4lE9Q2N0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf4lE9Q2N0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf4lE9Q2N0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf4lE9Q2N0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cpsf4lE9Q2N0 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.33■□□□□ 0.68
Cpsf4lE9Q2N0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.33■□□□□ 0.68
Cpsf4lE9Q2N0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.33■□□□□ 0.68
Cpsf4lE9Q2N0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpsf4lE9Q2N0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpsf4lE9Q2N0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms