Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.88■□□□□ 0.93
Dchs1E9PVD3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.87■□□□□ 0.93
Dchs1E9PVD3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dchs1E9PVD3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Dchs1E9PVD3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Dchs1E9PVD3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Dchs1E9PVD3 Mir3960-201ENSMUST00000198213 73 ntBASIC20.86■□□□□ 0.93
Dchs1E9PVD3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Dchs1E9PVD3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Dchs1E9PVD3 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.84■□□□□ 0.93
Dchs1E9PVD3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Dchs1E9PVD3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.84■□□□□ 0.93
Dchs1E9PVD3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Dchs1E9PVD3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Dchs1E9PVD3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.83■□□□□ 0.92
Dchs1E9PVD3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Dchs1E9PVD3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.82■□□□□ 0.92
Dchs1E9PVD3 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.82■□□□□ 0.92
Dchs1E9PVD3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.82■□□□□ 0.92
Dchs1E9PVD3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Dchs1E9PVD3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dchs1E9PVD3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dchs1E9PVD3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dchs1E9PVD3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Dchs1E9PVD3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Dchs1E9PVD3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dchs1E9PVD3 Serp2-204ENSMUST00000228055 705 ntBASIC20.8■□□□□ 0.92
Dchs1E9PVD3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dchs1E9PVD3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dchs1E9PVD3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dchs1E9PVD3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.79■□□□□ 0.92
Dchs1E9PVD3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Dchs1E9PVD3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dchs1E9PVD3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Dchs1E9PVD3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dchs1E9PVD3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dchs1E9PVD3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.78■□□□□ 0.92
Dchs1E9PVD3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dchs1E9PVD3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Dchs1E9PVD3 Rps24-207ENSMUST00000224568 714 ntBASIC20.77■□□□□ 0.92
Dchs1E9PVD3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Dchs1E9PVD3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Dchs1E9PVD3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.77■□□□□ 0.92
Dchs1E9PVD3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Dchs1E9PVD3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dchs1E9PVD3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.76■□□□□ 0.91
Dchs1E9PVD3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dchs1E9PVD3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Dchs1E9PVD3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dchs1E9PVD3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Dchs1E9PVD3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Dchs1E9PVD3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.74■□□□□ 0.91
Dchs1E9PVD3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.74■□□□□ 0.91
Dchs1E9PVD3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.74■□□□□ 0.91
Dchs1E9PVD3 Gm15820-201ENSMUST00000201566 728 ntBASIC20.74■□□□□ 0.91
Dchs1E9PVD3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Dchs1E9PVD3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dchs1E9PVD3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Dchs1E9PVD3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.73■□□□□ 0.91
Dchs1E9PVD3 Gm45102-201ENSMUST00000207427 857 ntBASIC20.73■□□□□ 0.91
Dchs1E9PVD3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.72■□□□□ 0.91
Dchs1E9PVD3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dchs1E9PVD3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Dchs1E9PVD3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dchs1E9PVD3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.71■□□□□ 0.91
Dchs1E9PVD3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dchs1E9PVD3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Dchs1E9PVD3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Dchs1E9PVD3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dchs1E9PVD3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Dchs1E9PVD3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Dchs1E9PVD3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dchs1E9PVD3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dchs1E9PVD3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dchs1E9PVD3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dchs1E9PVD3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dchs1E9PVD3 Gm14117-201ENSMUST00000122417 843 ntBASIC20.67■□□□□ 0.9
Dchs1E9PVD3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dchs1E9PVD3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Dchs1E9PVD3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dchs1E9PVD3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Dchs1E9PVD3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dchs1E9PVD3 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.66■□□□□ 0.9
Dchs1E9PVD3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.66■□□□□ 0.9
Dchs1E9PVD3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Dchs1E9PVD3 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.66■□□□□ 0.9
Dchs1E9PVD3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dchs1E9PVD3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Dchs1E9PVD3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dchs1E9PVD3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dchs1E9PVD3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dchs1E9PVD3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.65■□□□□ 0.9
Dchs1E9PVD3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Dchs1E9PVD3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Dchs1E9PVD3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Dchs1E9PVD3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dchs1E9PVD3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Dchs1E9PVD3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dchs1E9PVD3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dchs1E9PVD3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 138.9 ms