Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp27D3YV89 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp27D3YV89 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.25■□□□□ 0.67
Mmp27D3YV89 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.25■□□□□ 0.67
Mmp27D3YV89 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Mmp27D3YV89 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp27D3YV89 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp27D3YV89 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp27D3YV89 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp27D3YV89 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.24■□□□□ 0.67
Mmp27D3YV89 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp27D3YV89 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp27D3YV89 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp27D3YV89 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp27D3YV89 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp27D3YV89 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp27D3YV89 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp27D3YV89 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Mmp27D3YV89 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp27D3YV89 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Mmp27D3YV89 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.21■□□□□ 0.67
Mmp27D3YV89 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Mmp27D3YV89 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp27D3YV89 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Mmp27D3YV89 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp27D3YV89 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp27D3YV89 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.19■□□□□ 0.66
Mmp27D3YV89 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp27D3YV89 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp27D3YV89 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp27D3YV89 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Mmp27D3YV89 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp27D3YV89 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Mmp27D3YV89 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.18■□□□□ 0.66
Mmp27D3YV89 Notumos-201ENSMUST00000151998 2659 ntBASIC19.18■□□□□ 0.66
Mmp27D3YV89 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp27D3YV89 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp27D3YV89 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp27D3YV89 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Mmp27D3YV89 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp27D3YV89 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp27D3YV89 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Mmp27D3YV89 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Mmp27D3YV89 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp27D3YV89 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp27D3YV89 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Mmp27D3YV89 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.15■□□□□ 0.66
Mmp27D3YV89 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp27D3YV89 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Mmp27D3YV89 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
Mmp27D3YV89 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp27D3YV89 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp27D3YV89 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp27D3YV89 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Mmp27D3YV89 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Mmp27D3YV89 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp27D3YV89 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp27D3YV89 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp27D3YV89 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp27D3YV89 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp27D3YV89 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.13■□□□□ 0.65
Mmp27D3YV89 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp27D3YV89 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp27D3YV89 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp27D3YV89 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Mmp27D3YV89 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp27D3YV89 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp27D3YV89 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.11■□□□□ 0.65
Mmp27D3YV89 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp27D3YV89 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp27D3YV89 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Mmp27D3YV89 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp27D3YV89 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp27D3YV89 Gm6821-201ENSMUST00000107540 542 ntBASIC19.1■□□□□ 0.65
Mmp27D3YV89 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp27D3YV89 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp27D3YV89 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp27D3YV89 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Mmp27D3YV89 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Mmp27D3YV89 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.08■□□□□ 0.64
Mmp27D3YV89 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Mmp27D3YV89 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Mmp27D3YV89 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Mmp27D3YV89 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Mmp27D3YV89 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Mmp27D3YV89 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp27D3YV89 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp27D3YV89 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.07■□□□□ 0.64
Mmp27D3YV89 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp27D3YV89 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp27D3YV89 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp27D3YV89 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp27D3YV89 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.06■□□□□ 0.64
Mmp27D3YV89 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp27D3YV89 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp27D3YV89 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp27D3YV89 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp27D3YV89 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp27D3YV89 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Mmp27D3YV89 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms