Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC30.9■■■□□ 2.54
Scn7aB1AYL1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Scn7aB1AYL1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC30.9■■■□□ 2.54
Scn7aB1AYL1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Scn7aB1AYL1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC30.9■■■□□ 2.54
Scn7aB1AYL1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Scn7aB1AYL1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Scn7aB1AYL1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC30.87■■■□□ 2.53
Scn7aB1AYL1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Scn7aB1AYL1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC30.87■■■□□ 2.53
Scn7aB1AYL1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Scn7aB1AYL1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
Scn7aB1AYL1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC30.85■■■□□ 2.53
Scn7aB1AYL1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Scn7aB1AYL1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC30.85■■■□□ 2.53
Scn7aB1AYL1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC30.84■■■□□ 2.53
Scn7aB1AYL1 Terc-201ENSMUST00000082862 423 ntBASIC30.84■■■□□ 2.53
Scn7aB1AYL1 Gm37847-201ENSMUST00000192163 1497 ntBASIC30.84■■■□□ 2.53
Scn7aB1AYL1 Gm31748-201ENSMUST00000194938 1497 ntBASIC30.84■■■□□ 2.53
Scn7aB1AYL1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
Scn7aB1AYL1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC30.83■■■□□ 2.53
Scn7aB1AYL1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
Scn7aB1AYL1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Scn7aB1AYL1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Scn7aB1AYL1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC30.82■■■□□ 2.52
Scn7aB1AYL1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
Scn7aB1AYL1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30.82■■■□□ 2.52
Scn7aB1AYL1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Scn7aB1AYL1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Scn7aB1AYL1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC30.81■■■□□ 2.52
Scn7aB1AYL1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Scn7aB1AYL1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
Scn7aB1AYL1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Scn7aB1AYL1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Scn7aB1AYL1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
Scn7aB1AYL1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Scn7aB1AYL1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC30.77■■■□□ 2.52
Scn7aB1AYL1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
Scn7aB1AYL1 Amer2-203ENSMUST00000225247 2662 ntBASIC30.77■■■□□ 2.52
Scn7aB1AYL1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Scn7aB1AYL1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Scn7aB1AYL1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Scn7aB1AYL1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Scn7aB1AYL1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Scn7aB1AYL1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Scn7aB1AYL1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Scn7aB1AYL1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC30.74■■■□□ 2.51
Scn7aB1AYL1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Scn7aB1AYL1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Scn7aB1AYL1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Scn7aB1AYL1 Gm10420-201ENSMUST00000121713 882 ntBASIC30.72■■■□□ 2.51
Scn7aB1AYL1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Scn7aB1AYL1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Scn7aB1AYL1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC30.72■■■□□ 2.51
Scn7aB1AYL1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Scn7aB1AYL1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Scn7aB1AYL1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Scn7aB1AYL1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
Scn7aB1AYL1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
Scn7aB1AYL1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC30.71■■■□□ 2.51
Scn7aB1AYL1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Scn7aB1AYL1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Scn7aB1AYL1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Scn7aB1AYL1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Scn7aB1AYL1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Scn7aB1AYL1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC30.69■■■□□ 2.5
Scn7aB1AYL1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Scn7aB1AYL1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Scn7aB1AYL1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC30.68■■■□□ 2.5
Scn7aB1AYL1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Scn7aB1AYL1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Scn7aB1AYL1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
Scn7aB1AYL1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Scn7aB1AYL1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Scn7aB1AYL1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC30.66■■■□□ 2.5
Scn7aB1AYL1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
Scn7aB1AYL1 Gm4419-202ENSMUST00000226239 1431 ntBASIC30.65■■■□□ 2.5
Scn7aB1AYL1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
Scn7aB1AYL1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Scn7aB1AYL1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC30.64■■■□□ 2.5
Scn7aB1AYL1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC30.63■■■□□ 2.49
Scn7aB1AYL1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Scn7aB1AYL1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Scn7aB1AYL1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC30.62■■■□□ 2.49
Scn7aB1AYL1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC30.62■■■□□ 2.49
Scn7aB1AYL1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.62■■■□□ 2.49
Scn7aB1AYL1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Scn7aB1AYL1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Scn7aB1AYL1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC30.61■■■□□ 2.49
Scn7aB1AYL1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Scn7aB1AYL1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Scn7aB1AYL1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Scn7aB1AYL1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Scn7aB1AYL1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC30.59■■■□□ 2.49
Scn7aB1AYL1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Scn7aB1AYL1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC30.59■■■□□ 2.49
Scn7aB1AYL1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Scn7aB1AYL1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC30.58■■■□□ 2.49
Scn7aB1AYL1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
Scn7aB1AYL1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 132 ms