Protein–RNA interactions for Protein: B1AUC4

Ube2u, Ubiquitin-conjugating enzyme E2U (putative), mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2uB1AUC4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Ube2uB1AUC4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
Ube2uB1AUC4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC34.07■■■■□ 3.04
Ube2uB1AUC4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC34.07■■■■□ 3.04
Ube2uB1AUC4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
Ube2uB1AUC4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC34.05■■■■□ 3.04
Ube2uB1AUC4 Gm14121-201ENSMUST00000121441 1380 ntBASIC34.05■■■■□ 3.04
Ube2uB1AUC4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Ube2uB1AUC4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC34.04■■■■□ 3.04
Ube2uB1AUC4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
Ube2uB1AUC4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC34.04■■■■□ 3.04
Ube2uB1AUC4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
Ube2uB1AUC4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
Ube2uB1AUC4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC34.03■■■■□ 3.04
Ube2uB1AUC4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Ube2uB1AUC4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Ube2uB1AUC4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Ube2uB1AUC4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Ube2uB1AUC4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC34.01■■■■□ 3.04
Ube2uB1AUC4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC34.01■■■■□ 3.03
Ube2uB1AUC4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC34■■■■□ 3.03
Ube2uB1AUC4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC34■■■■□ 3.03
Ube2uB1AUC4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC34■■■■□ 3.03
Ube2uB1AUC4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC34■■■■□ 3.03
Ube2uB1AUC4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC34■■■■□ 3.03
Ube2uB1AUC4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC34■■■■□ 3.03
Ube2uB1AUC4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC34■■■■□ 3.03
Ube2uB1AUC4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Ube2uB1AUC4 Gm9812-201ENSMUST00000061934 968 ntBASIC33.99■■■■□ 3.03
Ube2uB1AUC4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Ube2uB1AUC4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC33.98■■■■□ 3.03
Ube2uB1AUC4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Ube2uB1AUC4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC33.98■■■■□ 3.03
Ube2uB1AUC4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC33.97■■■■□ 3.03
Ube2uB1AUC4 Gm9910-201ENSMUST00000195385 1550 ntBASIC33.97■■■■□ 3.03
Ube2uB1AUC4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
Ube2uB1AUC4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Ube2uB1AUC4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC33.96■■■■□ 3.03
Ube2uB1AUC4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Ube2uB1AUC4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC33.96■■■■□ 3.03
Ube2uB1AUC4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC33.95■■■■□ 3.03
Ube2uB1AUC4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC33.95■■■■□ 3.03
Ube2uB1AUC4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC33.95■■■■□ 3.02
Ube2uB1AUC4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC33.94■■■■□ 3.02
Ube2uB1AUC4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
Ube2uB1AUC4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC33.94■■■■□ 3.02
Ube2uB1AUC4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
Ube2uB1AUC4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Ube2uB1AUC4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
Ube2uB1AUC4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC33.93■■■■□ 3.02
Ube2uB1AUC4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC33.93■■■■□ 3.02
Ube2uB1AUC4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
Ube2uB1AUC4 Gm27502-201ENSMUST00000183495 199 ntBASIC33.92■■■■□ 3.02
Ube2uB1AUC4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC33.92■■■■□ 3.02
Ube2uB1AUC4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Ube2uB1AUC4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC33.92■■■■□ 3.02
Ube2uB1AUC4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Ube2uB1AUC4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC33.92■■■■□ 3.02
Ube2uB1AUC4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Ube2uB1AUC4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Ube2uB1AUC4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Ube2uB1AUC4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
Ube2uB1AUC4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC33.89■■■■□ 3.02
Ube2uB1AUC4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Ube2uB1AUC4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Ube2uB1AUC4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
Ube2uB1AUC4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Ube2uB1AUC4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC33.86■■■■□ 3.01
Ube2uB1AUC4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
Ube2uB1AUC4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC33.85■■■■□ 3.01
Ube2uB1AUC4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC33.85■■■■□ 3.01
Ube2uB1AUC4 Gm12366-201ENSMUST00000121722 873 ntBASIC33.85■■■■□ 3.01
Ube2uB1AUC4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC33.85■■■■□ 3.01
Ube2uB1AUC4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC33.85■■■■□ 3.01
Ube2uB1AUC4 Gm5786-201ENSMUST00000085368 882 ntBASIC33.85■■■■□ 3.01
Ube2uB1AUC4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC33.84■■■■□ 3.01
Ube2uB1AUC4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
Ube2uB1AUC4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
Ube2uB1AUC4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC33.83■■■■□ 3.01
Ube2uB1AUC4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC33.82■■■■□ 3.01
Ube2uB1AUC4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
Ube2uB1AUC4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC33.82■■■■□ 3
Ube2uB1AUC4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
Ube2uB1AUC4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
Ube2uB1AUC4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
Ube2uB1AUC4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC33.82■■■■□ 3
Ube2uB1AUC4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Ube2uB1AUC4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC33.81■■■■□ 3
Ube2uB1AUC4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC33.81■■■■□ 3
Ube2uB1AUC4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Ube2uB1AUC4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC33.8■■■■□ 3
Ube2uB1AUC4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Ube2uB1AUC4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Ube2uB1AUC4 Terc-201ENSMUST00000082862 423 ntBASIC33.79■■■■□ 3
Ube2uB1AUC4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Ube2uB1AUC4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Ube2uB1AUC4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Ube2uB1AUC4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Ube2uB1AUC4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Ube2uB1AUC4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms