Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Gm24970-201ENSMUST00000175582 82 ntBASIC14.47□□□□□ -0.09
Igkv3-5A0A140T8M6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv3-5A0A140T8M6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv3-5A0A140T8M6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv3-5A0A140T8M6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Igkv3-5A0A140T8M6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC14.46□□□□□ -0.09
Igkv3-5A0A140T8M6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC14.46□□□□□ -0.09
Igkv3-5A0A140T8M6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Igkv3-5A0A140T8M6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Igkv3-5A0A140T8M6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Igkv3-5A0A140T8M6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv3-5A0A140T8M6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Igkv3-5A0A140T8M6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC14.44□□□□□ -0.1
Igkv3-5A0A140T8M6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv3-5A0A140T8M6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv3-5A0A140T8M6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv3-5A0A140T8M6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv3-5A0A140T8M6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv3-5A0A140T8M6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv3-5A0A140T8M6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Igkv3-5A0A140T8M6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv3-5A0A140T8M6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Igkv3-5A0A140T8M6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Igkv3-5A0A140T8M6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv3-5A0A140T8M6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv3-5A0A140T8M6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv3-5A0A140T8M6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC14.42□□□□□ -0.1
Igkv3-5A0A140T8M6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv3-5A0A140T8M6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv3-5A0A140T8M6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv3-5A0A140T8M6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Igkv3-5A0A140T8M6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv3-5A0A140T8M6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Igkv3-5A0A140T8M6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv3-5A0A140T8M6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv3-5A0A140T8M6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv3-5A0A140T8M6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Igkv3-5A0A140T8M6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv3-5A0A140T8M6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-5A0A140T8M6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-5A0A140T8M6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-5A0A140T8M6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC14.4□□□□□ -0.1
Igkv3-5A0A140T8M6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-5A0A140T8M6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Igkv3-5A0A140T8M6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Igkv3-5A0A140T8M6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-5A0A140T8M6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-5A0A140T8M6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-5A0A140T8M6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv3-5A0A140T8M6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv3-5A0A140T8M6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv3-5A0A140T8M6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv3-5A0A140T8M6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv3-5A0A140T8M6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Igkv3-5A0A140T8M6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv3-5A0A140T8M6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv3-5A0A140T8M6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Igkv3-5A0A140T8M6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Igkv3-5A0A140T8M6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv3-5A0A140T8M6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv3-5A0A140T8M6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv3-5A0A140T8M6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Igkv3-5A0A140T8M6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv3-5A0A140T8M6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv3-5A0A140T8M6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.37□□□□□ -0.11
Igkv3-5A0A140T8M6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv3-5A0A140T8M6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv3-5A0A140T8M6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv3-5A0A140T8M6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.36□□□□□ -0.11
Igkv3-5A0A140T8M6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv3-5A0A140T8M6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv3-5A0A140T8M6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC14.36□□□□□ -0.11
Igkv3-5A0A140T8M6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Igkv3-5A0A140T8M6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv3-5A0A140T8M6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv3-5A0A140T8M6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv3-5A0A140T8M6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv3-5A0A140T8M6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv3-5A0A140T8M6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv3-5A0A140T8M6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Igkv3-5A0A140T8M6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv3-5A0A140T8M6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv3-5A0A140T8M6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv3-5A0A140T8M6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Igkv3-5A0A140T8M6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Igkv3-5A0A140T8M6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Igkv3-5A0A140T8M6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Igkv3-5A0A140T8M6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC14.33□□□□□ -0.11
Igkv3-5A0A140T8M6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC14.33□□□□□ -0.11
Igkv3-5A0A140T8M6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Igkv3-5A0A140T8M6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.33□□□□□ -0.12
Igkv3-5A0A140T8M6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Igkv3-5A0A140T8M6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Igkv3-5A0A140T8M6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Igkv3-5A0A140T8M6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Igkv3-5A0A140T8M6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Igkv3-5A0A140T8M6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv3-5A0A140T8M6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv3-5A0A140T8M6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv3-5A0A140T8M6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms