Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV22A0A0B4J277 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV22A0A0B4J277 MVK-208ENST00000539696 608 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV22A0A0B4J277 THRA-202ENST00000394121 2260 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV22A0A0B4J277 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV22A0A0B4J277 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV22A0A0B4J277 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV22A0A0B4J277 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRAV22A0A0B4J277 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV22A0A0B4J277 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV22A0A0B4J277 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV22A0A0B4J277 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV22A0A0B4J277 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV22A0A0B4J277 PROC-203ENST00000409048 1586 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV22A0A0B4J277 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV22A0A0B4J277 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAV22A0A0B4J277 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAV22A0A0B4J277 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV22A0A0B4J277 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV22A0A0B4J277 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV22A0A0B4J277 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV22A0A0B4J277 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV22A0A0B4J277 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV22A0A0B4J277 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV22A0A0B4J277 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV22A0A0B4J277 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV22A0A0B4J277 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV22A0A0B4J277 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV22A0A0B4J277 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV22A0A0B4J277 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV22A0A0B4J277 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV22A0A0B4J277 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV22A0A0B4J277 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV22A0A0B4J277 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV22A0A0B4J277 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV22A0A0B4J277 CLDN5-201ENST00000403084 2357 ntBASIC14.23□□□□□ -0.13
TRAV22A0A0B4J277 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV22A0A0B4J277 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV22A0A0B4J277 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV22A0A0B4J277 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV22A0A0B4J277 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV22A0A0B4J277 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV22A0A0B4J277 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV22A0A0B4J277 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV22A0A0B4J277 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV22A0A0B4J277 LINC01003-201ENST00000564834 1764 ntBASIC14.21□□□□□ -0.13
TRAV22A0A0B4J277 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV22A0A0B4J277 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV22A0A0B4J277 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
TRAV22A0A0B4J277 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
TRAV22A0A0B4J277 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV22A0A0B4J277 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV22A0A0B4J277 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV22A0A0B4J277 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV22A0A0B4J277 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV22A0A0B4J277 AC145676.1-201ENST00000514988 2004 ntBASIC14.2□□□□□ -0.14
TRAV22A0A0B4J277 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
TRAV22A0A0B4J277 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV22A0A0B4J277 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV22A0A0B4J277 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV22A0A0B4J277 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV22A0A0B4J277 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV22A0A0B4J277 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV22A0A0B4J277 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV22A0A0B4J277 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV22A0A0B4J277 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV22A0A0B4J277 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV22A0A0B4J277 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV22A0A0B4J277 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV22A0A0B4J277 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV22A0A0B4J277 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV22A0A0B4J277 AC012676.1-201ENST00000574705 1949 ntBASIC14.18□□□□□ -0.14
TRAV22A0A0B4J277 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV22A0A0B4J277 AC133561.1-201ENST00000568600 2415 ntBASIC14.18□□□□□ -0.14
TRAV22A0A0B4J277 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRAV22A0A0B4J277 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV22A0A0B4J277 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV22A0A0B4J277 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV22A0A0B4J277 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
TRAV22A0A0B4J277 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV22A0A0B4J277 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV22A0A0B4J277 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV22A0A0B4J277 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV22A0A0B4J277 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV22A0A0B4J277 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV22A0A0B4J277 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
TRAV22A0A0B4J277 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAV22A0A0B4J277 AC015813.7-201ENST00000623294 581 ntBASIC14.17□□□□□ -0.14
TRAV22A0A0B4J277 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV22A0A0B4J277 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRAV22A0A0B4J277 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV22A0A0B4J277 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV22A0A0B4J277 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV22A0A0B4J277 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV22A0A0B4J277 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAV22A0A0B4J277 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV22A0A0B4J277 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV22A0A0B4J277 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV22A0A0B4J277 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV22A0A0B4J277 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms