Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV13-1A0A0B4J241 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV13-1A0A0B4J241 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV13-1A0A0B4J241 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV13-1A0A0B4J241 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TRAV13-1A0A0B4J241 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV13-1A0A0B4J241 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV13-1A0A0B4J241 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV13-1A0A0B4J241 CAHM-201ENST00000604200 896 ntBASIC17.34■□□□□ 0.37
TRAV13-1A0A0B4J241 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV13-1A0A0B4J241 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.33■□□□□ 0.37
TRAV13-1A0A0B4J241 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV13-1A0A0B4J241 AP002414.2-202ENST00000590929 1450 ntBASIC17.33■□□□□ 0.37
TRAV13-1A0A0B4J241 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV13-1A0A0B4J241 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRAV13-1A0A0B4J241 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV13-1A0A0B4J241 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV13-1A0A0B4J241 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV13-1A0A0B4J241 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV13-1A0A0B4J241 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV13-1A0A0B4J241 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRAV13-1A0A0B4J241 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV13-1A0A0B4J241 AL449106.1-201ENST00000608517 1980 ntBASIC17.31■□□□□ 0.36
TRAV13-1A0A0B4J241 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV13-1A0A0B4J241 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV13-1A0A0B4J241 AC097358.2-201ENST00000607541 1159 ntBASIC17.31■□□□□ 0.36
TRAV13-1A0A0B4J241 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV13-1A0A0B4J241 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV13-1A0A0B4J241 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV13-1A0A0B4J241 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRAV13-1A0A0B4J241 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV13-1A0A0B4J241 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV13-1A0A0B4J241 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV13-1A0A0B4J241 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV13-1A0A0B4J241 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV13-1A0A0B4J241 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV13-1A0A0B4J241 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV13-1A0A0B4J241 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRAV13-1A0A0B4J241 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV13-1A0A0B4J241 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.28■□□□□ 0.36
TRAV13-1A0A0B4J241 AC136428.2-201ENST00000563187 214 ntBASIC17.28■□□□□ 0.36
TRAV13-1A0A0B4J241 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV13-1A0A0B4J241 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV13-1A0A0B4J241 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.28■□□□□ 0.36
TRAV13-1A0A0B4J241 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV13-1A0A0B4J241 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV13-1A0A0B4J241 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV13-1A0A0B4J241 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TRAV13-1A0A0B4J241 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV13-1A0A0B4J241 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV13-1A0A0B4J241 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV13-1A0A0B4J241 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRAV13-1A0A0B4J241 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRAV13-1A0A0B4J241 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV13-1A0A0B4J241 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRAV13-1A0A0B4J241 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV13-1A0A0B4J241 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV13-1A0A0B4J241 MIR762-201ENST00000390236 83 ntBASIC17.25■□□□□ 0.35
TRAV13-1A0A0B4J241 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV13-1A0A0B4J241 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRAV13-1A0A0B4J241 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRAV13-1A0A0B4J241 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV13-1A0A0B4J241 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV13-1A0A0B4J241 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV13-1A0A0B4J241 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV13-1A0A0B4J241 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAV13-1A0A0B4J241 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV13-1A0A0B4J241 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV13-1A0A0B4J241 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV13-1A0A0B4J241 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV13-1A0A0B4J241 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV13-1A0A0B4J241 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV13-1A0A0B4J241 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV13-1A0A0B4J241 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV13-1A0A0B4J241 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV13-1A0A0B4J241 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRAV13-1A0A0B4J241 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV13-1A0A0B4J241 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV13-1A0A0B4J241 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV13-1A0A0B4J241 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV13-1A0A0B4J241 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV13-1A0A0B4J241 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV13-1A0A0B4J241 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAV13-1A0A0B4J241 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV13-1A0A0B4J241 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV13-1A0A0B4J241 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRAV13-1A0A0B4J241 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV13-1A0A0B4J241 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV13-1A0A0B4J241 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV13-1A0A0B4J241 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV13-1A0A0B4J241 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV13-1A0A0B4J241 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV13-1A0A0B4J241 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV13-1A0A0B4J241 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRAV13-1A0A0B4J241 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRAV13-1A0A0B4J241 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV13-1A0A0B4J241 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV13-1A0A0B4J241 CHML-205ENST00000638160 705 ntTSL 3 BASIC17.2■□□□□ 0.34
TRAV13-1A0A0B4J241 AC018358.1-201ENST00000631079 1402 ntBASIC17.2■□□□□ 0.34
TRAV13-1A0A0B4J241 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms