Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9-4A0A0B4J1K2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9-4A0A0B4J1K2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9-4A0A0B4J1K2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9-4A0A0B4J1K2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9-4A0A0B4J1K2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9-4A0A0B4J1K2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav9-4A0A0B4J1K2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.15■□□□□ 0.34
Trav9-4A0A0B4J1K2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9-4A0A0B4J1K2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9-4A0A0B4J1K2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9-4A0A0B4J1K2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9-4A0A0B4J1K2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9-4A0A0B4J1K2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9-4A0A0B4J1K2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9-4A0A0B4J1K2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9-4A0A0B4J1K2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9-4A0A0B4J1K2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav9-4A0A0B4J1K2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Trav9-4A0A0B4J1K2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9-4A0A0B4J1K2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9-4A0A0B4J1K2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9-4A0A0B4J1K2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9-4A0A0B4J1K2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trav9-4A0A0B4J1K2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9-4A0A0B4J1K2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trav9-4A0A0B4J1K2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.13■□□□□ 0.33
Trav9-4A0A0B4J1K2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9-4A0A0B4J1K2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav9-4A0A0B4J1K2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trav9-4A0A0B4J1K2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9-4A0A0B4J1K2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9-4A0A0B4J1K2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9-4A0A0B4J1K2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav9-4A0A0B4J1K2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav9-4A0A0B4J1K2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9-4A0A0B4J1K2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9-4A0A0B4J1K2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9-4A0A0B4J1K2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9-4A0A0B4J1K2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9-4A0A0B4J1K2 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.1■□□□□ 0.33
Trav9-4A0A0B4J1K2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trav9-4A0A0B4J1K2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.1■□□□□ 0.33
Trav9-4A0A0B4J1K2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9-4A0A0B4J1K2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9-4A0A0B4J1K2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9-4A0A0B4J1K2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9-4A0A0B4J1K2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9-4A0A0B4J1K2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav9-4A0A0B4J1K2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9-4A0A0B4J1K2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9-4A0A0B4J1K2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trav9-4A0A0B4J1K2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav9-4A0A0B4J1K2 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.08■□□□□ 0.32
Trav9-4A0A0B4J1K2 Mir3960-201ENSMUST00000198213 73 ntBASIC17.08■□□□□ 0.32
Trav9-4A0A0B4J1K2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav9-4A0A0B4J1K2 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.07■□□□□ 0.32
Trav9-4A0A0B4J1K2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9-4A0A0B4J1K2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9-4A0A0B4J1K2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trav9-4A0A0B4J1K2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9-4A0A0B4J1K2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9-4A0A0B4J1K2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9-4A0A0B4J1K2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.06■□□□□ 0.32
Trav9-4A0A0B4J1K2 Gm6311-201ENSMUST00000073790 878 ntBASIC17.06■□□□□ 0.32
Trav9-4A0A0B4J1K2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9-4A0A0B4J1K2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9-4A0A0B4J1K2 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.05■□□□□ 0.32
Trav9-4A0A0B4J1K2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav9-4A0A0B4J1K2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav9-4A0A0B4J1K2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav9-4A0A0B4J1K2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9-4A0A0B4J1K2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav9-4A0A0B4J1K2 Gm45364-201ENSMUST00000210883 159 ntBASIC17.04■□□□□ 0.32
Trav9-4A0A0B4J1K2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9-4A0A0B4J1K2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9-4A0A0B4J1K2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav9-4A0A0B4J1K2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9-4A0A0B4J1K2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9-4A0A0B4J1K2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav9-4A0A0B4J1K2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9-4A0A0B4J1K2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9-4A0A0B4J1K2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav9-4A0A0B4J1K2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.03■□□□□ 0.32
Trav9-4A0A0B4J1K2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9-4A0A0B4J1K2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav9-4A0A0B4J1K2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9-4A0A0B4J1K2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.03■□□□□ 0.32
Trav9-4A0A0B4J1K2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9-4A0A0B4J1K2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9-4A0A0B4J1K2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9-4A0A0B4J1K2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav9-4A0A0B4J1K2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9-4A0A0B4J1K2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav9-4A0A0B4J1K2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav9-4A0A0B4J1K2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9-4A0A0B4J1K2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9-4A0A0B4J1K2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9-4A0A0B4J1K2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9-4A0A0B4J1K2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms