Protein–RNA interactions for Protein: A0A0A6YYG2

TRBV6-6, T-cell receptor beta variable 6-6 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-6A0A0A6YYG2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV6-6A0A0A6YYG2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV6-6A0A0A6YYG2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV6-6A0A0A6YYG2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TRBV6-6A0A0A6YYG2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV6-6A0A0A6YYG2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV6-6A0A0A6YYG2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV6-6A0A0A6YYG2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRBV6-6A0A0A6YYG2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.92■□□□□ 0.94
TRBV6-6A0A0A6YYG2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.92■□□□□ 0.94
TRBV6-6A0A0A6YYG2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV6-6A0A0A6YYG2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV6-6A0A0A6YYG2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TRBV6-6A0A0A6YYG2 AC087741.3-201ENST00000624270 1347 ntBASIC20.9■□□□□ 0.94
TRBV6-6A0A0A6YYG2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.9■□□□□ 0.94
TRBV6-6A0A0A6YYG2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.9■□□□□ 0.94
TRBV6-6A0A0A6YYG2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV6-6A0A0A6YYG2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.89■□□□□ 0.93
TRBV6-6A0A0A6YYG2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV6-6A0A0A6YYG2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV6-6A0A0A6YYG2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV6-6A0A0A6YYG2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.88■□□□□ 0.93
TRBV6-6A0A0A6YYG2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRBV6-6A0A0A6YYG2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV6-6A0A0A6YYG2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV6-6A0A0A6YYG2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TRBV6-6A0A0A6YYG2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV6-6A0A0A6YYG2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRBV6-6A0A0A6YYG2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.87■□□□□ 0.93
TRBV6-6A0A0A6YYG2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
TRBV6-6A0A0A6YYG2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TRBV6-6A0A0A6YYG2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV6-6A0A0A6YYG2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.86■□□□□ 0.93
TRBV6-6A0A0A6YYG2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV6-6A0A0A6YYG2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.86■□□□□ 0.93
TRBV6-6A0A0A6YYG2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV6-6A0A0A6YYG2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV6-6A0A0A6YYG2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TRBV6-6A0A0A6YYG2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV6-6A0A0A6YYG2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.85■□□□□ 0.93
TRBV6-6A0A0A6YYG2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV6-6A0A0A6YYG2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV6-6A0A0A6YYG2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TRBV6-6A0A0A6YYG2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.84■□□□□ 0.93
TRBV6-6A0A0A6YYG2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV6-6A0A0A6YYG2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.84■□□□□ 0.93
TRBV6-6A0A0A6YYG2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.84■□□□□ 0.93
TRBV6-6A0A0A6YYG2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.83■□□□□ 0.93
TRBV6-6A0A0A6YYG2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRBV6-6A0A0A6YYG2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRBV6-6A0A0A6YYG2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.83■□□□□ 0.93
TRBV6-6A0A0A6YYG2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.83■□□□□ 0.93
TRBV6-6A0A0A6YYG2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.83■□□□□ 0.93
TRBV6-6A0A0A6YYG2 AC044849.2-201ENST00000606596 710 ntBASIC20.83■□□□□ 0.93
TRBV6-6A0A0A6YYG2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRBV6-6A0A0A6YYG2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TRBV6-6A0A0A6YYG2 AC091060.1-201ENST00000623524 1766 ntBASIC20.82■□□□□ 0.92
TRBV6-6A0A0A6YYG2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV6-6A0A0A6YYG2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.82■□□□□ 0.92
TRBV6-6A0A0A6YYG2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.81■□□□□ 0.92
TRBV6-6A0A0A6YYG2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV6-6A0A0A6YYG2 AL162393.1-201ENST00000437852 946 ntBASIC20.81■□□□□ 0.92
TRBV6-6A0A0A6YYG2 AC110285.7-201ENST00000624417 1536 ntBASIC20.81■□□□□ 0.92
TRBV6-6A0A0A6YYG2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV6-6A0A0A6YYG2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV6-6A0A0A6YYG2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV6-6A0A0A6YYG2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV6-6A0A0A6YYG2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV6-6A0A0A6YYG2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV6-6A0A0A6YYG2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV6-6A0A0A6YYG2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.78■□□□□ 0.92
TRBV6-6A0A0A6YYG2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV6-6A0A0A6YYG2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV6-6A0A0A6YYG2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRBV6-6A0A0A6YYG2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRBV6-6A0A0A6YYG2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
TRBV6-6A0A0A6YYG2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.77■□□□□ 0.92
TRBV6-6A0A0A6YYG2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRBV6-6A0A0A6YYG2 AL449106.1-201ENST00000608517 1980 ntBASIC20.76■□□□□ 0.91
TRBV6-6A0A0A6YYG2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV6-6A0A0A6YYG2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV6-6A0A0A6YYG2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.76■□□□□ 0.91
TRBV6-6A0A0A6YYG2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV6-6A0A0A6YYG2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.76■□□□□ 0.91
TRBV6-6A0A0A6YYG2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV6-6A0A0A6YYG2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV6-6A0A0A6YYG2 AC145676.1-201ENST00000514988 2004 ntBASIC20.75■□□□□ 0.91
TRBV6-6A0A0A6YYG2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.75■□□□□ 0.91
TRBV6-6A0A0A6YYG2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV6-6A0A0A6YYG2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV6-6A0A0A6YYG2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRBV6-6A0A0A6YYG2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.75■□□□□ 0.91
TRBV6-6A0A0A6YYG2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV6-6A0A0A6YYG2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV6-6A0A0A6YYG2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.74■□□□□ 0.91
TRBV6-6A0A0A6YYG2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV6-6A0A0A6YYG2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TRBV6-6A0A0A6YYG2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV6-6A0A0A6YYG2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TRBV6-6A0A0A6YYG2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms