Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.43■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv1-43A0A0A6YXN5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.41■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ighv1-43A0A0A6YXN5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.38■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.37■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Gm12366-201ENSMUST00000121722 873 ntBASIC21.37■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.37■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.37■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.37■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.37■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Terc-201ENSMUST00000082862 423 ntBASIC21.37■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Gm5786-201ENSMUST00000085368 882 ntBASIC21.37■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.36■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.36■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ighv1-43A0A0A6YXN5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ighv1-43A0A0A6YXN5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ighv1-43A0A0A6YXN5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ighv1-43A0A0A6YXN5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.33■■□□□ 1.01
Ighv1-43A0A0A6YXN5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ighv1-43A0A0A6YXN5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Ighv1-43A0A0A6YXN5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ighv1-43A0A0A6YXN5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ighv1-43A0A0A6YXN5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ighv1-43A0A0A6YXN5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ighv1-43A0A0A6YXN5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.32■■□□□ 1
Ighv1-43A0A0A6YXN5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ighv1-43A0A0A6YXN5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ighv1-43A0A0A6YXN5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ighv1-43A0A0A6YXN5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.31■■□□□ 1
Ighv1-43A0A0A6YXN5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ighv1-43A0A0A6YXN5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ighv1-43A0A0A6YXN5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ighv1-43A0A0A6YXN5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ighv1-43A0A0A6YXN5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ighv1-43A0A0A6YXN5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ighv1-43A0A0A6YXN5 Gm27502-201ENSMUST00000183495 199 ntBASIC21.29■■□□□ 1
Ighv1-43A0A0A6YXN5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ighv1-43A0A0A6YXN5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ighv1-43A0A0A6YXN5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ighv1-43A0A0A6YXN5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.26■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.26■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.26■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ighv1-43A0A0A6YXN5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.24■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Gm14523-201ENSMUST00000117260 558 ntBASIC21.23■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Gm7332-201ENSMUST00000118351 454 ntBASIC21.23■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ighv1-43A0A0A6YXN5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms