Protein–RNA interactions for Protein: A0A0A6YX19

Ighv6-4, Immunoglobulin heavy variable V6-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-4A0A0A6YX19 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv6-4A0A0A6YX19 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv6-4A0A0A6YX19 Gm26115-201ENSMUST00000175605 87 ntBASIC18.23■□□□□ 0.51
Ighv6-4A0A0A6YX19 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv6-4A0A0A6YX19 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv6-4A0A0A6YX19 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv6-4A0A0A6YX19 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ighv6-4A0A0A6YX19 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv6-4A0A0A6YX19 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.22■□□□□ 0.51
Ighv6-4A0A0A6YX19 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv6-4A0A0A6YX19 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv6-4A0A0A6YX19 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv6-4A0A0A6YX19 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv6-4A0A0A6YX19 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv6-4A0A0A6YX19 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv6-4A0A0A6YX19 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv6-4A0A0A6YX19 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv6-4A0A0A6YX19 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv6-4A0A0A6YX19 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv6-4A0A0A6YX19 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv6-4A0A0A6YX19 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Ighv6-4A0A0A6YX19 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv6-4A0A0A6YX19 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv6-4A0A0A6YX19 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv6-4A0A0A6YX19 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv6-4A0A0A6YX19 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv6-4A0A0A6YX19 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv6-4A0A0A6YX19 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv6-4A0A0A6YX19 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv6-4A0A0A6YX19 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv6-4A0A0A6YX19 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv6-4A0A0A6YX19 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv6-4A0A0A6YX19 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Ighv6-4A0A0A6YX19 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv6-4A0A0A6YX19 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv6-4A0A0A6YX19 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv6-4A0A0A6YX19 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.16■□□□□ 0.5
Ighv6-4A0A0A6YX19 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv6-4A0A0A6YX19 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv6-4A0A0A6YX19 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ighv6-4A0A0A6YX19 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv6-4A0A0A6YX19 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv6-4A0A0A6YX19 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv6-4A0A0A6YX19 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.15■□□□□ 0.5
Ighv6-4A0A0A6YX19 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv6-4A0A0A6YX19 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv6-4A0A0A6YX19 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
Ighv6-4A0A0A6YX19 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ighv6-4A0A0A6YX19 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ighv6-4A0A0A6YX19 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv6-4A0A0A6YX19 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv6-4A0A0A6YX19 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv6-4A0A0A6YX19 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv6-4A0A0A6YX19 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
Ighv6-4A0A0A6YX19 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv6-4A0A0A6YX19 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv6-4A0A0A6YX19 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv6-4A0A0A6YX19 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv6-4A0A0A6YX19 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv6-4A0A0A6YX19 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv6-4A0A0A6YX19 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv6-4A0A0A6YX19 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv6-4A0A0A6YX19 Gm8109-201ENSMUST00000194076 746 ntBASIC18.12■□□□□ 0.49
Ighv6-4A0A0A6YX19 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv6-4A0A0A6YX19 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Ighv6-4A0A0A6YX19 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv6-4A0A0A6YX19 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ighv6-4A0A0A6YX19 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv6-4A0A0A6YX19 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.11■□□□□ 0.49
Ighv6-4A0A0A6YX19 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv6-4A0A0A6YX19 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ighv6-4A0A0A6YX19 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv6-4A0A0A6YX19 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv6-4A0A0A6YX19 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.1■□□□□ 0.49
Ighv6-4A0A0A6YX19 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv6-4A0A0A6YX19 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv6-4A0A0A6YX19 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv6-4A0A0A6YX19 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv6-4A0A0A6YX19 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv6-4A0A0A6YX19 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv6-4A0A0A6YX19 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv6-4A0A0A6YX19 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Ighv6-4A0A0A6YX19 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv6-4A0A0A6YX19 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.07■□□□□ 0.48
Ighv6-4A0A0A6YX19 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv6-4A0A0A6YX19 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Ighv6-4A0A0A6YX19 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ighv6-4A0A0A6YX19 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv6-4A0A0A6YX19 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.06■□□□□ 0.48
Ighv6-4A0A0A6YX19 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv6-4A0A0A6YX19 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Ighv6-4A0A0A6YX19 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv6-4A0A0A6YX19 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ighv6-4A0A0A6YX19 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv6-4A0A0A6YX19 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv6-4A0A0A6YX19 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv6-4A0A0A6YX19 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv6-4A0A0A6YX19 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv6-4A0A0A6YX19 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv6-4A0A0A6YX19 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms