Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-4A0A075B6B4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trav6-4A0A075B6B4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.63■□□□□ 0.41
Trav6-4A0A075B6B4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-4A0A075B6B4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-4A0A075B6B4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-4A0A075B6B4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-4A0A075B6B4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6-4A0A075B6B4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.62■□□□□ 0.41
Trav6-4A0A075B6B4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav6-4A0A075B6B4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.62■□□□□ 0.41
Trav6-4A0A075B6B4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6-4A0A075B6B4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6-4A0A075B6B4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-4A0A075B6B4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-4A0A075B6B4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.61■□□□□ 0.41
Trav6-4A0A075B6B4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Trav6-4A0A075B6B4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-4A0A075B6B4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-4A0A075B6B4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-4A0A075B6B4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Trav6-4A0A075B6B4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-4A0A075B6B4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-4A0A075B6B4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-4A0A075B6B4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-4A0A075B6B4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav6-4A0A075B6B4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav6-4A0A075B6B4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav6-4A0A075B6B4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Trav6-4A0A075B6B4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trav6-4A0A075B6B4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav6-4A0A075B6B4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6-4A0A075B6B4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6-4A0A075B6B4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trav6-4A0A075B6B4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trav6-4A0A075B6B4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trav6-4A0A075B6B4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Trav6-4A0A075B6B4 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.56■□□□□ 0.4
Trav6-4A0A075B6B4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-4A0A075B6B4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav6-4A0A075B6B4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.56■□□□□ 0.4
Trav6-4A0A075B6B4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trav6-4A0A075B6B4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.56■□□□□ 0.4
Trav6-4A0A075B6B4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-4A0A075B6B4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-4A0A075B6B4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-4A0A075B6B4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-4A0A075B6B4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-4A0A075B6B4 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.55■□□□□ 0.4
Trav6-4A0A075B6B4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-4A0A075B6B4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-4A0A075B6B4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-4A0A075B6B4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-4A0A075B6B4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-4A0A075B6B4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-4A0A075B6B4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-4A0A075B6B4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-4A0A075B6B4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-4A0A075B6B4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-4A0A075B6B4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-4A0A075B6B4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.54■□□□□ 0.4
Trav6-4A0A075B6B4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-4A0A075B6B4 Mir3960-201ENSMUST00000198213 73 ntBASIC17.53■□□□□ 0.4
Trav6-4A0A075B6B4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trav6-4A0A075B6B4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-4A0A075B6B4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-4A0A075B6B4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-4A0A075B6B4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-4A0A075B6B4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-4A0A075B6B4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav6-4A0A075B6B4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav6-4A0A075B6B4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-4A0A075B6B4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-4A0A075B6B4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trav6-4A0A075B6B4 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.51■□□□□ 0.39
Trav6-4A0A075B6B4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-4A0A075B6B4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-4A0A075B6B4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-4A0A075B6B4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-4A0A075B6B4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-4A0A075B6B4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-4A0A075B6B4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-4A0A075B6B4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav6-4A0A075B6B4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-4A0A075B6B4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.48■□□□□ 0.39
Trav6-4A0A075B6B4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-4A0A075B6B4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trav6-4A0A075B6B4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav6-4A0A075B6B4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-4A0A075B6B4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.47■□□□□ 0.39
Trav6-4A0A075B6B4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-4A0A075B6B4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-4A0A075B6B4 Gm6311-201ENSMUST00000073790 878 ntBASIC17.46■□□□□ 0.39
Trav6-4A0A075B6B4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-4A0A075B6B4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-4A0A075B6B4 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.46■□□□□ 0.38
Trav6-4A0A075B6B4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-4A0A075B6B4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-4A0A075B6B4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav6-4A0A075B6B4 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms