Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav9d-1A0A075B699 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav9d-1A0A075B699 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Trav9d-1A0A075B699 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav9d-1A0A075B699 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav9d-1A0A075B699 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav9d-1A0A075B699 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trav9d-1A0A075B699 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.61■□□□□ 0.41
Trav9d-1A0A075B699 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav9d-1A0A075B699 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav9d-1A0A075B699 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trav9d-1A0A075B699 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav9d-1A0A075B699 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav9d-1A0A075B699 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trav9d-1A0A075B699 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav9d-1A0A075B699 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav9d-1A0A075B699 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav9d-1A0A075B699 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav9d-1A0A075B699 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Trav9d-1A0A075B699 Nkain2-201ENSMUST00000092602 558 ntBASIC17.59■□□□□ 0.41
Trav9d-1A0A075B699 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav9d-1A0A075B699 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav9d-1A0A075B699 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trav9d-1A0A075B699 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav9d-1A0A075B699 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav9d-1A0A075B699 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav9d-1A0A075B699 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav9d-1A0A075B699 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav9d-1A0A075B699 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav9d-1A0A075B699 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav9d-1A0A075B699 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav9d-1A0A075B699 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Trav9d-1A0A075B699 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9d-1A0A075B699 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9d-1A0A075B699 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Trav9d-1A0A075B699 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.56■□□□□ 0.4
Trav9d-1A0A075B699 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9d-1A0A075B699 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9d-1A0A075B699 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trav9d-1A0A075B699 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9d-1A0A075B699 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9d-1A0A075B699 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9d-1A0A075B699 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.54■□□□□ 0.4
Trav9d-1A0A075B699 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav9d-1A0A075B699 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trav9d-1A0A075B699 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trav9d-1A0A075B699 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9d-1A0A075B699 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9d-1A0A075B699 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9d-1A0A075B699 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9d-1A0A075B699 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9d-1A0A075B699 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trav9d-1A0A075B699 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9d-1A0A075B699 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9d-1A0A075B699 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trav9d-1A0A075B699 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9d-1A0A075B699 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9d-1A0A075B699 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9d-1A0A075B699 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9d-1A0A075B699 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav9d-1A0A075B699 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.52■□□□□ 0.4
Trav9d-1A0A075B699 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9d-1A0A075B699 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav9d-1A0A075B699 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.52■□□□□ 0.39
Trav9d-1A0A075B699 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9d-1A0A075B699 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9d-1A0A075B699 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9d-1A0A075B699 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9d-1A0A075B699 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9d-1A0A075B699 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9d-1A0A075B699 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9d-1A0A075B699 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav9d-1A0A075B699 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9d-1A0A075B699 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9d-1A0A075B699 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trav9d-1A0A075B699 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9d-1A0A075B699 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9d-1A0A075B699 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav9d-1A0A075B699 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trav9d-1A0A075B699 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav9d-1A0A075B699 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav9d-1A0A075B699 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav9d-1A0A075B699 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9d-1A0A075B699 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav9d-1A0A075B699 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.48■□□□□ 0.39
Trav9d-1A0A075B699 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9d-1A0A075B699 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9d-1A0A075B699 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9d-1A0A075B699 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav9d-1A0A075B699 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9d-1A0A075B699 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav9d-1A0A075B699 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9d-1A0A075B699 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9d-1A0A075B699 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav9d-1A0A075B699 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav9d-1A0A075B699 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav9d-1A0A075B699 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav9d-1A0A075B699 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav9d-1A0A075B699 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9d-1A0A075B699 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms