Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav16A0A075B653 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav16A0A075B653 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trav16A0A075B653 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav16A0A075B653 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav16A0A075B653 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav16A0A075B653 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trav16A0A075B653 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav16A0A075B653 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trav16A0A075B653 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Trav16A0A075B653 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav16A0A075B653 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav16A0A075B653 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav16A0A075B653 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav16A0A075B653 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav16A0A075B653 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav16A0A075B653 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav16A0A075B653 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav16A0A075B653 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav16A0A075B653 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav16A0A075B653 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav16A0A075B653 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav16A0A075B653 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav16A0A075B653 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav16A0A075B653 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav16A0A075B653 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav16A0A075B653 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav16A0A075B653 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav16A0A075B653 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav16A0A075B653 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav16A0A075B653 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trav16A0A075B653 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav16A0A075B653 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav16A0A075B653 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav16A0A075B653 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav16A0A075B653 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav16A0A075B653 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav16A0A075B653 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav16A0A075B653 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav16A0A075B653 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.6■□□□□ 0.41
Trav16A0A075B653 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav16A0A075B653 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav16A0A075B653 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav16A0A075B653 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Trav16A0A075B653 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav16A0A075B653 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trav16A0A075B653 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav16A0A075B653 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.58■□□□□ 0.41
Trav16A0A075B653 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.58■□□□□ 0.41
Trav16A0A075B653 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav16A0A075B653 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav16A0A075B653 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav16A0A075B653 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav16A0A075B653 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav16A0A075B653 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav16A0A075B653 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav16A0A075B653 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav16A0A075B653 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav16A0A075B653 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.56■□□□□ 0.4
Trav16A0A075B653 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.56■□□□□ 0.4
Trav16A0A075B653 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav16A0A075B653 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav16A0A075B653 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav16A0A075B653 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav16A0A075B653 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav16A0A075B653 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav16A0A075B653 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav16A0A075B653 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.55■□□□□ 0.4
Trav16A0A075B653 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav16A0A075B653 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav16A0A075B653 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav16A0A075B653 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav16A0A075B653 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.54■□□□□ 0.4
Trav16A0A075B653 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.54■□□□□ 0.4
Trav16A0A075B653 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trav16A0A075B653 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav16A0A075B653 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav16A0A075B653 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav16A0A075B653 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav16A0A075B653 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav16A0A075B653 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav16A0A075B653 Particl-201ENSMUST00000205370 1560 ntBASIC17.53■□□□□ 0.4
Trav16A0A075B653 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav16A0A075B653 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav16A0A075B653 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.52■□□□□ 0.4
Trav16A0A075B653 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav16A0A075B653 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trav16A0A075B653 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Trav16A0A075B653 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav16A0A075B653 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav16A0A075B653 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav16A0A075B653 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav16A0A075B653 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav16A0A075B653 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav16A0A075B653 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav16A0A075B653 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav16A0A075B653 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav16A0A075B653 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav16A0A075B653 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav16A0A075B653 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 141.3 ms