Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7-6A0A075B640 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7-6A0A075B640 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7-6A0A075B640 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7-6A0A075B640 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav7-6A0A075B640 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trav7-6A0A075B640 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav7-6A0A075B640 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Trav7-6A0A075B640 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Trav7-6A0A075B640 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-6A0A075B640 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Trav7-6A0A075B640 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-6A0A075B640 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-6A0A075B640 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-6A0A075B640 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav7-6A0A075B640 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-6A0A075B640 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-6A0A075B640 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav7-6A0A075B640 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7-6A0A075B640 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7-6A0A075B640 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7-6A0A075B640 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav7-6A0A075B640 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7-6A0A075B640 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trav7-6A0A075B640 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7-6A0A075B640 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7-6A0A075B640 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7-6A0A075B640 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav7-6A0A075B640 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav7-6A0A075B640 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7-6A0A075B640 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav7-6A0A075B640 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7-6A0A075B640 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7-6A0A075B640 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7-6A0A075B640 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7-6A0A075B640 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav7-6A0A075B640 Gm30023-201ENSMUST00000197970 889 ntBASIC15.92■□□□□ 0.14
Trav7-6A0A075B640 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7-6A0A075B640 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7-6A0A075B640 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-6A0A075B640 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-6A0A075B640 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-6A0A075B640 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-6A0A075B640 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-6A0A075B640 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav7-6A0A075B640 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-6A0A075B640 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-6A0A075B640 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-6A0A075B640 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-6A0A075B640 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-6A0A075B640 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-6A0A075B640 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-6A0A075B640 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav7-6A0A075B640 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-6A0A075B640 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-6A0A075B640 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-6A0A075B640 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Trav7-6A0A075B640 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav7-6A0A075B640 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7-6A0A075B640 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-6A0A075B640 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-6A0A075B640 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-6A0A075B640 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-6A0A075B640 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-6A0A075B640 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-6A0A075B640 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-6A0A075B640 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-6A0A075B640 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav7-6A0A075B640 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-6A0A075B640 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-6A0A075B640 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-6A0A075B640 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.86■□□□□ 0.13
Trav7-6A0A075B640 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.86■□□□□ 0.13
Trav7-6A0A075B640 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-6A0A075B640 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-6A0A075B640 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Trav7-6A0A075B640 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-6A0A075B640 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7-6A0A075B640 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7-6A0A075B640 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav7-6A0A075B640 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7-6A0A075B640 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7-6A0A075B640 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7-6A0A075B640 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav7-6A0A075B640 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7-6A0A075B640 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav7-6A0A075B640 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7-6A0A075B640 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7-6A0A075B640 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav7-6A0A075B640 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7-6A0A075B640 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7-6A0A075B640 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC15.83■□□□□ 0.12
Trav7-6A0A075B640 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav7-6A0A075B640 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav7-6A0A075B640 Particl-201ENSMUST00000205370 1560 ntBASIC15.83■□□□□ 0.12
Trav7-6A0A075B640 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7-6A0A075B640 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav7-6A0A075B640 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7-6A0A075B640 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7-6A0A075B640 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms