Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9n-4A0A075B631 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9n-4A0A075B631 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9n-4A0A075B631 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav9n-4A0A075B631 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9n-4A0A075B631 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9n-4A0A075B631 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav9n-4A0A075B631 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav9n-4A0A075B631 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9n-4A0A075B631 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9n-4A0A075B631 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9n-4A0A075B631 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav9n-4A0A075B631 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav9n-4A0A075B631 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Trav9n-4A0A075B631 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9n-4A0A075B631 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9n-4A0A075B631 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9n-4A0A075B631 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9n-4A0A075B631 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9n-4A0A075B631 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav9n-4A0A075B631 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav9n-4A0A075B631 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9n-4A0A075B631 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9n-4A0A075B631 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Trav9n-4A0A075B631 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav9n-4A0A075B631 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trav9n-4A0A075B631 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9n-4A0A075B631 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9n-4A0A075B631 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav9n-4A0A075B631 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
Trav9n-4A0A075B631 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav9n-4A0A075B631 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9n-4A0A075B631 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9n-4A0A075B631 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
Trav9n-4A0A075B631 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav9n-4A0A075B631 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9n-4A0A075B631 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav9n-4A0A075B631 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav9n-4A0A075B631 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9n-4A0A075B631 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9n-4A0A075B631 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9n-4A0A075B631 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9n-4A0A075B631 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav9n-4A0A075B631 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9n-4A0A075B631 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9n-4A0A075B631 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9n-4A0A075B631 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav9n-4A0A075B631 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav9n-4A0A075B631 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9n-4A0A075B631 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Trav9n-4A0A075B631 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9n-4A0A075B631 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav9n-4A0A075B631 Nkain2-201ENSMUST00000092602 558 ntBASIC15.53■□□□□ 0.08
Trav9n-4A0A075B631 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9n-4A0A075B631 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9n-4A0A075B631 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9n-4A0A075B631 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9n-4A0A075B631 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav9n-4A0A075B631 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav9n-4A0A075B631 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav9n-4A0A075B631 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-4A0A075B631 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-4A0A075B631 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav9n-4A0A075B631 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-4A0A075B631 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-4A0A075B631 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav9n-4A0A075B631 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-4A0A075B631 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-4A0A075B631 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-4A0A075B631 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-4A0A075B631 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-4A0A075B631 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav9n-4A0A075B631 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Trav9n-4A0A075B631 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9n-4A0A075B631 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav9n-4A0A075B631 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9n-4A0A075B631 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav9n-4A0A075B631 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav9n-4A0A075B631 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9n-4A0A075B631 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC15.5■□□□□ 0.07
Trav9n-4A0A075B631 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Trav9n-4A0A075B631 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9n-4A0A075B631 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-4A0A075B631 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-4A0A075B631 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-4A0A075B631 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-4A0A075B631 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav9n-4A0A075B631 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav9n-4A0A075B631 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-4A0A075B631 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-4A0A075B631 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9n-4A0A075B631 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9n-4A0A075B631 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9n-4A0A075B631 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav9n-4A0A075B631 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9n-4A0A075B631 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9n-4A0A075B631 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.48■□□□□ 0.07
Trav9n-4A0A075B631 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav9n-4A0A075B631 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9n-4A0A075B631 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms