Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav9-1A0A075B601 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trav9-1A0A075B601 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.84■□□□□ 0.45
Trav9-1A0A075B601 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.84■□□□□ 0.45
Trav9-1A0A075B601 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav9-1A0A075B601 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav9-1A0A075B601 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav9-1A0A075B601 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav9-1A0A075B601 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Trav9-1A0A075B601 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.83■□□□□ 0.44
Trav9-1A0A075B601 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trav9-1A0A075B601 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav9-1A0A075B601 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav9-1A0A075B601 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav9-1A0A075B601 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav9-1A0A075B601 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav9-1A0A075B601 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav9-1A0A075B601 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav9-1A0A075B601 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.81■□□□□ 0.44
Trav9-1A0A075B601 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav9-1A0A075B601 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav9-1A0A075B601 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav9-1A0A075B601 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav9-1A0A075B601 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav9-1A0A075B601 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav9-1A0A075B601 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav9-1A0A075B601 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav9-1A0A075B601 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav9-1A0A075B601 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Trav9-1A0A075B601 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav9-1A0A075B601 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav9-1A0A075B601 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Trav9-1A0A075B601 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav9-1A0A075B601 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav9-1A0A075B601 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav9-1A0A075B601 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav9-1A0A075B601 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trav9-1A0A075B601 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav9-1A0A075B601 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav9-1A0A075B601 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav9-1A0A075B601 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.78■□□□□ 0.44
Trav9-1A0A075B601 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav9-1A0A075B601 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trav9-1A0A075B601 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav9-1A0A075B601 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav9-1A0A075B601 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.77■□□□□ 0.44
Trav9-1A0A075B601 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trav9-1A0A075B601 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav9-1A0A075B601 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav9-1A0A075B601 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav9-1A0A075B601 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav9-1A0A075B601 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav9-1A0A075B601 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trav9-1A0A075B601 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav9-1A0A075B601 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav9-1A0A075B601 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav9-1A0A075B601 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav9-1A0A075B601 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav9-1A0A075B601 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav9-1A0A075B601 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.74■□□□□ 0.43
Trav9-1A0A075B601 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav9-1A0A075B601 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.74■□□□□ 0.43
Trav9-1A0A075B601 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav9-1A0A075B601 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav9-1A0A075B601 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav9-1A0A075B601 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav9-1A0A075B601 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav9-1A0A075B601 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trav9-1A0A075B601 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav9-1A0A075B601 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav9-1A0A075B601 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav9-1A0A075B601 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav9-1A0A075B601 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav9-1A0A075B601 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav9-1A0A075B601 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav9-1A0A075B601 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav9-1A0A075B601 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav9-1A0A075B601 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav9-1A0A075B601 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav9-1A0A075B601 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav9-1A0A075B601 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.69■□□□□ 0.42
Trav9-1A0A075B601 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav9-1A0A075B601 Gm6821-201ENSMUST00000107540 542 ntBASIC17.68■□□□□ 0.42
Trav9-1A0A075B601 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav9-1A0A075B601 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.68■□□□□ 0.42
Trav9-1A0A075B601 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav9-1A0A075B601 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.68■□□□□ 0.42
Trav9-1A0A075B601 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav9-1A0A075B601 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav9-1A0A075B601 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav9-1A0A075B601 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav9-1A0A075B601 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav9-1A0A075B601 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav9-1A0A075B601 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav9-1A0A075B601 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Trav9-1A0A075B601 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav9-1A0A075B601 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav9-1A0A075B601 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav9-1A0A075B601 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav9-1A0A075B601 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms